Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868068.1_cds_XP_016433352.1_29515
CDS Infomation

[gene=LOC107759853] [db_xref=GeneID:107759853] [protein=spermidine-binding periplasmic protein SpuE-like isoform X2] [protein_id=XP_016433352.1] [location=join(28680..29001,30160..30311,31551..31799,37754..37888,38397..38576,39819..39980,40557..40686,41518..41561)] [gbkey=CDS]
Sequence

ATGTCTTTGCTCTCACTTCCTCTCCCAATCCCAATTCCCCACAGCTCTAAACCCCATTAC
AACACTTTTCGTCAGCACAATTCTCGAACTTTCCACTTCCACAAAAACCTTAGGCTCTCC
GTTTGGGCCTCCGGCGTCCCCGTTCACCGTAACTCGGCGACTTTTCCGGCGTCCGGCGAA
TTTCTCCGTCAAATAGCTTCTTCTACCGTTCTTTTTATCAGTTTGGGTTCGGCCCTTTTT
GCCTTTCCAGCTGTTGCTTCTTCTACTCACTTTCCTCCTCAAGTCCCTTCTCTAACTCAG
CTTCAGGACCAAGAATCTCAAGGCACTGGAGTTGGAAATTCGGAAAATGTGGAGGATATC
GATGATGAAGAAATTCAAGCAGCATTTGAGAAATGGAAGTCTAAGACGTATGCTTTGACT
GTCCCTCTAAGGGTTGTTTCTCTTAGTAACTCTTTTCCTCCTGTATGGCTCAAGGATTTC
TTGCGATCTCAAGGGAAGAGAGTGAGACTACGTTCTGAGTTTCGTCAAAGCCTGCAAGAC
ATCTTTCATGAACTTTGTATGCCTAATCAGAAAGGAAAAGTTAATCCTAAATCTGCTTTG
GCAGCTGATATTGTCACTCTTGGTGATACCTGGCTCAATTATGCCATTGAGAAGAGGTTA
ATCGAGCCGATGCATGGTTTAGAAGATCAAGATTGGTTTAAGAATTTAAGTAACAAATGG
AAGGTATATTTGCGCAGGAGCGATGAAGGGAAATTGGATTCTCGTGGTAGGATCTGGGCG
GCTCCATATAGATGGGGAAGCATAGTGATAGCTTACAAGAAAACCGAATTTCGAAAGCGT
AAAATGGCTCCTATAAAGGACTGGGCTGATCTGTGGCGACCAGAGCTTGCTGGAAAAATT
TCAATGGTTGATTCACCACGAGAGATTGTTGGTGCAGTGTTAAAGTATATGGGGGCATCA
TACAACACAACTAACATGTCTGAAGTCGCTGGTGGGAGAGAGGCTGTGCAGCAGAATCTT
GCATCACTTGTTAAACAGGTCCGGCTATTTGATAGCGGCCACTATCTTAAAGCCTTCGGA
GTTGGAGATGTATGGGTAGCTGTTGGATGGAGCAATGATGTTATTCCTGCTGCAAAGCGG
ATGTCAAATATTGCTGTAGTTGTTCCCAAATCTGGTGCAAGTCTGTGGGCTGATTGCTGG
GCAATACCTGCTGCTTCGAGAATTGCAACTGATCAAATTGGAGGAAGAGTTAGAGGACCA
TCACCAGTAGTGCATCAGTGGATAGAATTCTGCTTGCAAGCTGAAAGGTTCAAAGACGAC
GTTGTTCCAGCATTTCAGCATTTCAAGTTGGGACTTGGGCATTACCCACTGTAA

Peptide Sequence

PEP ID

XP_016433352.1
PEP Infomation

PREDICTED: spermidine-binding periplasmic protein SpuE-like isoform X2 [Nicotiana tabacum]
Sequence

MSLLSLPLPIPIPHSSKPHYNTFRQHNSRTFHFHKNLRLSVWASGVPVHRNSATFPASGE
FLRQIASSTVLFISLGSALFAFPAVASSTHFPPQVPSLTQLQDQESQGTGVGNSENVEDI
DDEEIQAAFEKWKSKTYALTVPLRVVSLSNSFPPVWLKDFLRSQGKRVRLRSEFRQSLQD
IFHELCMPNQKGKVNPKSALAADIVTLGDTWLNYAIEKRLIEPMHGLEDQDWFKNLSNKW
KVYLRRSDEGKLDSRGRIWAAPYRWGSIVIAYKKTEFRKRKMAPIKDWADLWRPELAGKI
SMVDSPREIVGAVLKYMGASYNTTNMSEVAGGREAVQQNLASLVKQVRLFDSGHYLKAFG
VGDVWVAVGWSNDVIPAAKRMSNIAVVVPKSGASLWADCWAIPAASRIATDQIGGRVRGP
SPVVHQWIEFCLQAERFKDDVVPAFQHFKLGLGHYPL

Transcript Sequence

Gene sequence data has not been registered.